PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S17456.30
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 271aa    MW: 30425.1 Da    PI: 4.1107
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S17456.30genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20188237355
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    y+GVr+++ +g+++AeIrdp++ng   r++lg++ t+e+Aa a+++a+ k++g
  Jcr4S17456.30 188 YTGVRRRP-WGKYAAEIRDPKKNG--SRIWLGTYETPEDAALAYDRAAFKMRG 237
                    99******.***********9998..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.222187245IPR001471AP2/ERF domain
CDDcd000183.10E-31187247No hitNo description
Gene3DG3DSA:3.30.730.101.2E-31187246IPR001471AP2/ERF domain
SMARTSM003803.0E-38187251IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-23187246IPR016177DNA-binding domain
PRINTSPR003671.6E-12188199IPR001471AP2/ERF domain
PfamPF008471.4E-13188237IPR001471AP2/ERF domain
PRINTSPR003671.6E-12227247IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MWGENTSPPA DDFFFLEPIQ HYLLEDNFGN LMNSFDDSIH KPFKFDDLDD FTLDCSILGD  60
YESNSQFDFT VPETTMAAPV ESKSQDAATS SEEVEILINS FNNSSSTSST LIFTDNTSNY  120
SPFNIDDLDD FTIDSSIFGD SEFISQFDFP VAETTMPTVE QKSQEAAASF EEAVVTHNSN  180
TPSKGWQYTG VRRRPWGKYA AEIRDPKKNG SRIWLGTYET PEDAALAYDR AAFKMRGSKA  240
KLNFPHLIGS DDYEPIRVTN KRGSPERSSS S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-32183252170ATERF1
3gcc_A4e-32183252170ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012083860.10.0PREDICTED: ethylene-responsive transcription factor 13-like
SwissprotQ8L9K18e-50ERF99_ARATH; Ethylene-responsive transcription factor 13
TrEMBLA0A067KAL31e-141A0A067KAL3_JATCU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-48ethylene-responsive element binding factor 13